Spatial analysis and sequential equation modeling (SEM) of genetic diversity in date palm (Phoenix dactylifera L.)

Ahmed TA, Al-Qaradawi AY. Molecular phylogeny of Qatari date palm genotypes using simple sequence repeats markers. Biotechnology. 2009;8:126–31.

Article  CAS  Google Scholar 

Ahmed W, Feyissa T, Tesfaye K, Farrakh S. Genetic diversity and population structure of date palms (Phoenix dactylifera L.) in Ethiopia using microsatellite markers. J Genet Eng Biotechnol. 2021;19:64.

Article  PubMed  PubMed Central  Google Scholar 

Al-Ruqaishi IA, Davey M, Alderson P, Mayes S. Genetic relationships and genotype tracing in date palms (Phoenix dactylifera L.) in Oman, based on microsatellite markers. Plant Genet Resour Charact Util. 2008;6:70–2.

Article  CAS  Google Scholar 

Arabnezhad H, Bahar M, Mohammadi HR, Latifian M. Development, characterization, and use of microsatellite markers for germplasm analysis in date palm (Phoenix dactylifera L.). Sci Hortic. 2012;134:150–6.

Article  CAS  Google Scholar 

Arenas M, Ray N, Currat M, Excoffier L. Consequences of range contractions and range shifts on molecular diversity. Mol Biol Evol. 2011;29:207–18. https://doi.org/10.1093/molbev/msr187.

Article  CAS  PubMed  Google Scholar 

Chaluvadi SR, Khanam S, Aly MAM, Bennetzen JL. Genetic diversity and population structure of native and introduced Date palm (Phoenix dactylifera L.) germplasm in the United Arab Emirates. Trop Plant Biol. 2014;7:30–41.

Article  Google Scholar 

Charlesworth D. Evolution of plant breeding systems-review. Curr Biol. 2006;16:726–35.

Article  Google Scholar 

Dash G, Paul J. CB-SEM vs PLS-SEM methods for research in social sciences and technology forecasting. Technol Forecast Soc Chang. 2021;173: 121092. https://doi.org/10.1016/j.techfore.2021.121092.

Article  Google Scholar 

Elmeer K, Sarwath H, Malek J, Baum M, Hamwieh A. New microsatellite markers for assessment of genetic diversity in date palm (Phoenix dactylifera L.). Biotechnology. 2011;1:91–7.

Google Scholar 

Elshibli S, Korpelainen H. Microsatellite markers reveal high genetic diversity in date palm (Phoenix dactylifera L.) germplasm from Sudan. Genetica. 2008;134:251–60.

Article  CAS  PubMed  Google Scholar 

Flowers JM, Hazzouri KhM, Gros-Balthazard M, Mo Z, Koutroumpa K, Perrakis A, Ferrand S, Khierallah HSM, Fuller DQ, Aberlenc F, Fournaraki Ch, Purugganan MD. Cross-species hybridization and the origin of North African date palms. Proc Natl Acad Sci USA. 2019;116:1651–8.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Garot E, Dussert S, Domergue F, Joët T, Fock-Bastide I, Combes MC, Lashermes Ph. Multi-approach analysis reveals local adaptation in a widespread forest tree of reunion island. Plant Cell Physiol. 2021;62:280–92. https://doi.org/10.1093/pcp/pcaa160.

Article  CAS  PubMed  Google Scholar 

Grace JB. Structural equation modeling for observational studies. J Wildl Manag. 2010;72:14–22.

Article  Google Scholar 

Gros-Balthazard M, Galimberti M, Kousathanas A, Newton C, Ivorra S, Paradis L, Vigouroux Y, Carter R, Tengberg M, Battesti V, Santoni S, Falquet L, Pintaud JCh, Terral JF, Wegmann D. The discovery of wild date palms in Oman reveals a complex domestication history involving centers in the Middle East and Africa. Curr Biol. 2017;27:2211–8.

Article  CAS  PubMed  Google Scholar 

Harrison S, Noss R. Endemism hotspots are linked to stable climatic refugia. Ann Bot. 2017;119:207–14. https://doi.org/10.1093/aob/mcw248.

Article  PubMed  PubMed Central  Google Scholar 

Hussein MA. Determination of sex-specific DNA markers for date palm (Phoenix dactylifera L.) grown in Egypt utilizing nuclear microsatellite markers. J Agric Chem Biotechnol. 2015;6:237–46.

Google Scholar 

Ikeda M, Tada R, Ozaki K. Astronomical pacing of the global silica cycle recorded in Mesozoic bedded cherts. Nat Commun. 2017;8:15532. https://doi.org/10.1038/ncomms15532.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Jaradat AA. Synthesis and assessment of date palm genetic diversity studies. Emir J Food Agric. 2014;26:934–52.

Article  Google Scholar 

Jombart T, Devillard S, Balloux F. Discriminant analysis of principal components: a new method for the analysis of genetically structured populations. BMC Genet. 2010;11:94.

Article  PubMed  PubMed Central  Google Scholar 

Khierallah HSM, Bader SM, Baum M, Hamwieh A. Genetic diversity of Iraqi Date palms revealed by microsatellite polymorphism. J Am Soc Hortic Sci. 2011;136:282–7.

Article  CAS  Google Scholar 

Lefcheck JS. piecewiseSEM: piecewise structural equation modeling in r for ecology, evolution, and systematics. Methods Ecol Evol. 2016;7:573–9.

Article  Google Scholar 

LoveLess MD, Hamrick JL. Ecological determinants of genetic structure in plant populations. Annu Rev Ecol Syst. 1984;15:65–95.

Article  Google Scholar 

Marcer A, Mendez-Vigo B, Alonso-Blanco C, Pico FX. Tackling intraspecific genetic structure in distribution models better reflects species geographical range. Ecol Evol. 2010;6:2084–97. https://doi.org/10.1002/ece3.

Article  Google Scholar 

Maryam JM, Awan FS. Development of a molecular method for sex identification in date palm (Phoenix dactylifera L.) plantlets using novel sex-linked microsatellite markers. 3 Biotech. 2016;6:22.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Meirmans PG. GENODIVE version 3.0: easy-to-use software for the analysis of genetic data of diploids and polyploids. Mol Ecol Resour. 2020;20:1126–31.

Article  CAS  PubMed  PubMed Central  Google Scholar 

Meng HH, Su T, Gao XY, Li J, Jiang XL, Sun H, et al. Warm-cold colonization: response of oaks to uplift of the Himalaya-Hengduan Mountains. Mol Ecol. 2017;26:3276–94. https://doi.org/10.1111/mec.14092.

Article  CAS  PubMed  Google Scholar 

Mohei EL, Mohasseb HAA, Al-Khateeb AA, Al-Khateeb SA, Chowdhury K, El-Shemy HA, Aldaej MI. Identification and sequencing of DateSRY gene: a novel tool for sex determination of date palm (Phoenix dactylifera L.). Saudi J Biol Sci. 2019;26:514–23.

Article  Google Scholar 

Munier P. Le palmier-dattier. Maisonneuve et Larose, Coll. Techniques Agricoles et Productions Tropicales n°XXIV, Paris, 1973.

Neill J. Exploratory factor analysis, lecture 5, survey research and design in psychology, 2013.

Ortego J, Gugger PF, Sork VL. Climatically stable landscapes predict patterns of genetic structure and admixture in the Californian canyon live oak. J Biogeogr. 2015;42:328–38. https://doi.org/10.1111/jbi.12419.

Article  Google Scholar 

Peakall R, Smouse PE. GENALEX 6: genetic analysis in Excel Population genetic software for teaching and research. Mol Ecol Not. 2006;6:288–95.

Article  Google Scholar 

Poelchau MF, Hamrick JL. Differential effects of landscape-level environmental features on genetic structure in three codistributed tree species in Central America. Mol Ecol. 2012;21:4970–82.

Article  PubMed  Google Scholar 

Razgoura O, Foresterc B, Taggartd JB, et al. Considering adaptive genetic variation in climate change vulnerability assessment reduces species range loss projections. PNAS. 2019;116:10418–23.

Article  Google Scholar 

Rieseberg LH, Willis JH. Plant speciation. Science. 2007;17(317):910–4. https://doi.org/10.1126/science.1137729.

Article  CAS  Google Scholar 

Saboori S, Noormohammadi Z, Sheidai M, Marashi S. SCoT molecular markers and genetic fingerprinting of date palm (Phoenix dactylifera L.) cultivars. Genet Resour Crop Evol. 2019;67:73–82.

Article  Google Scholar 

Saboori S, Noormohammadi Z, Sheidai M, Marashi SS. Date palm (Phoenix dactylifera L.) cultivar relationships based on chloroplast genotyping. Iran J Sci Technol Trans A Sci. 2021;45:833–40.

Article  Google Scholar 

Saboori S, Noormohammadi Z, Sheidai M, Marashi SS. Insight into date palm diversity: genetic and morphological investigations. Plant Mol Biol Rep. 2021;39:137–45.

Article  Google Scholar 

Sharifi M, Sheidai M, Koohdar F. Genetic fingerprinting of date palm (Pheonix dactylifera L.) by using ISSR and cpDNA sequences. Indian J Genet. 2018;78:507–14.

CAS  Google Scholar

Comments (0)

No login
gif