Evaluation of cleaning methods and viral indexing in sweet potato genotypes

ANP (Agência Nacional do Petróleo, Gás Natural e Biocombustíveis). Painel Dinâmico de Produtores de Etanol. Available at: https://app.powerbi.com/view?r=eyJrIjoiZWU1MTc0ZjYtMjVhYi00YTEwLWJhODMtODQ0MDdhNmJiMWYwIiwidCI6IjQ0OTlmNGZmLTI0YTYtNGI0Mi1iN2VmLTEyNGFmY2FkYzkxMyJ9&pageName=ReportSection8aa0cee5b2b8a941e5e0%22. Accessed on 11/10/23.

Ateka E, Njeru R, Kibaru AG, Kimenju J, BARG E, GIBSON R, Vetten H (2005) Identification and distribution of virus infecting sweet potato in Kenya. Annal Appl Biol 144:371–379. https://doi.org/10.1111/j.1744-7348.2004.tb00353.x

Barreto HG, de Pádua Milagres FA, de Araújo GC, Daúde MM, Benedito VA (2020) Diagnosing the novel SARS-CoV-2 by quantitative RT-PCR: variations and opportunities. J Mol Med 98:1727–1736. https://doi.org/10.1007/s00109-020-01992-x

Article  CAS  PubMed  Google Scholar 

Benke AP, Krishna R, Khandagale K, Gawande S, Shelke P, Dukare S, Dhumal S, Singh M, Mahajan V (2023) Efficient elimination of viruses from garlic using a combination of shoot meristem culture, thermotherapy, and chemical treatment. Pathogens 12:129. https://doi.org/10.3390/pathogens12010129

Article  CAS  PubMed  PubMed Central  Google Scholar 

Bertaccini A, Bellardi MG, Rustignoli E (1989) Virus-free Freesia corms produced by meristem-tip culture. Adv Hortic Sci 3:133–137

Google Scholar 

Brito B, Hick P (2023) Milk as a diagnostic fluid to monitor viral diseases in dairy cattle. Aust Vet J 102:11–18. https://doi.org/10.1111/avj.13293

Article  CAS  PubMed  Google Scholar 

Buko DH, Spetz C, Hvoslef-Eide AK (2020) Next generation sequencing as a method to verify virus elimination using heat treatment and meristem tip culture in the five most widely used sweet potato varieties in Ethiopia. Afr J Biotechnol 19:458–463. https://doi.org/10.5897/AJB2019.17164

Article  CAS  Google Scholar 

Bušić A, Marđetko N, Kundas S, Morzak G, Belskaya H, Ivančić Šantek M, Komes D, Novak S, Šantek B (2018) Bioethanol production from renewable raw materials and its separation and purification: a review. Food Technol Biotechnol 56:289–311. https://doi.org/10.17113/ftb.56.03.18.5546

Cao M, Lan P, Li F, Abad J, Zhou C, Li R (2017) Genome characterization of sweet potato symptomless virus 1: a mastrevirus with an unusual nonanucleotide sequence. Arch Virol 162:2881–2884. https://doi.org/10.1007/s00705-017-3396-z

Article  CAS  PubMed  Google Scholar 

Cele KH, Ghai M, Snyman SJ (2024) Elimination of sugarcane mosaic virus, sugarcane yellow leaf virus, and co-infections in sugarcane (Saccharum spp. hybrids) shoot tips via osmo- and cryo-therapy. In Vitro Cell Dev Biol - Plant 60:405–411. https://doi.org/10.1007/s11627-024-10449-6

Article  CAS  Google Scholar 

Chirkov S, Zakubanskiy A, Sheveleva A, Zubkova N, Mitrofanova I (2023) Detection and molecular characterization of viruses infecting clematis in Russia. J Plant Pathol 105:173–183. https://doi.org/10.1007/s42161-022-01242-8

Article  Google Scholar 

Clark CA, Davis JA, Abad JA, Cuellar WJ, Fuentes S, Kreuze JF, Gibson RW, Mukasa SB, Tugume AK, Tairo FD, Valkonen JPT (2012) Sweet potato viruses: 15 years of progress on understanding and managing complex diseases. Plant Dis 96:168–185. https://doi.org/10.1094/PDIS-07-11-0550

Article  CAS  PubMed  Google Scholar 

Daurov D, Daurova A, Karimov A, Tolegenova D, Volkov D, Raimbek D, Zhambakin K, Shamekova M (2020) Determining effective methods of obtaining virus-free potato for cultivation in Kazakhstan. Am J Potato Res 97:367–375. https://doi.org/10.1007/s12230-020-09787-z

Article  CAS  Google Scholar 

Daurov D, Zhapar K, Daurova A, Volkov D, Bakbergenova M, Tolegenova D, Shamekova M, Zhambakin K (2018) Production of virus-free sweet potato planting material for the southeast of Kazakhstan. Int J Agric Biol 20:851–856. https://doi.org/10.17957/IJAB/15.0576

El-Sawy A, Gomaa A, Abd-El-Zaher MH, Reda A, Danial N (2013) Production of somatic embryogenesis via in vitro culture of stigma and style for elimination of Citrus psorosis virus (CpsV) from some citrus genotypes. J Hort Sci Ornam Plant 5:110–117. https://doi.org/10.5829/idosi.jhsop.2013.5.2.274

Article  Google Scholar 

El Sayed TA, Saker KEA, El Shorbagy AE, Mandour AM, Alajouz MJ, Soliman AM (2023) Characterization and elimination of grapevine fanleaf virus using thermotherapy in combination with meristem tip culture. Egypt Acad J Biol Sci C Physiol Mol Biol 15:101–117. https://doi.org/10.21608/eajbsc.2023.312619

Feyissa T, Dugassa G (2011) In vitro production of virus-free sweet potato [Ipomoea batatas (L.) Lam] by meristem culture and thermotherapy Ethiop J Sci 34:17–28. https://doi.org/10.4314/SINET.V34I1.78226

Freitas-Vanzo AT de, Silva C de C da, Chaves VCA, Garcia MH, Aquino LT de, Molina R de O (2021) Detection of bean golden mosaic virus in fabaceae family plants. Braz J Anim Environ Res 4:1021–1032. https://doi.org/10.34188/bjaerv4n1-083

Gonçalves RC, Daude MM, De Souza MR, Moraes MBF, Moreira RO, Da Silveira MA, Ságio SA, Barreto HG (2021) Evaluation of extraction methods for obtaining high-quality RNA from sweet potato. Genet Mol Res 20:gmr18939. https://doi.org/10.4238/gmr18939

González-Lázaro M, Hernández-Rosas F, Gómez-Merino FC, Pastelín-Solano MC, Bulbarela-Marini JE, Solano-Rodríguez LA, Castro OC, González-Lázaro M, Hernández-Rosas F, Gómez-Merino FC, Pastelín-Solano MC, Bulbarela-Marini JE, Solano-Rodríguez LA, Castro OC (2019) PCR diagnosis and in vitro sanitation of the papaya MSXJ hybrid with ringspot virus disease. Chil J Agric Res 79:376–384. https://doi.org/10.4067/S0718-58392019000300376

Article  Google Scholar 

Jeon SM, Naing AH, Kim H-H, Chung MY, Lim KB, Kim CK (2016) Elimination of chrysanthemum stunt viroid and chrysanthemum chlorotic mottle viroid from infected chrysanthemum by cryopreservation. Protoplasma 253:1135–1144. https://doi.org/10.1007/s00709-015-0874-6

Article  CAS  PubMed  Google Scholar 

Karyeija RF, Gibson RW, Valkonen JPT (1998) The significance of sweet potato feathery mottle virus in subsistence sweet potato production in Africa. Plant Dis 82:4–15. https://doi.org/10.1094/PDIS.1998.82.1.4

Article  CAS  PubMed  Google Scholar 

Kavalappara SR, Milner H, Konakalla NC, Morgan K, Sparks AN, McGregor C, Culbreath AK, Wintermantel WM, Bag S (2021) High throughput sequencing-aided survey reveals widespread mixed infections of whitefly-transmittedviruses in cucurbits in Georgia, USA. Viruses 13:988. https://doi.org/10.3390/v13060988

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kidulile CE, Ateka EM, Alakonya AE, Ndunguru JC (2018) Efficacy of chemotherapy and thermotherapy in elimination of East African cassava mosaic virus from Tanzanian cassava landrace. J Phytopathol 166:739–745. https://doi.org/10.1111/jph.12725

Article  CAS  Google Scholar 

Kiemo FW, Salamon P, Jewehan A, Tóth Z, Szabó Z (2022) Detection and elimination of viruses infecting sweet potatoes in Hungary. Plant Pathol 71:1001–1009. https://doi.org/10.1111/ppa.13519

Article  CAS  Google Scholar 

Knapp E, Hanzer V, Weiss HH, Da Câmara Machado A, Weiss B, Wang Q, Katinger H, Laimer Da Câmara Machado M (1995) New of virus elimination in fruit trees. Acta Hortic 386:409–418. https://doi.org/10.17660/ActaHortic.1995.386.56

Lachowicz-Wolak A, Klimowicz-Bodys MD, Płoneczka-Janeczko K, Bykowy M, Siedlecka M, Cinciała J, Rypuła K (2022) The prevalence, coexistence, and correlations between seven pathogens detected by a PCR method from South-Western poland dairy cattle suffering from bovine respiratory disease. Microorganisms 10:1487. https://doi.org/10.3390/microorganisms10081487

Article  PubMed  PubMed Central  Google Scholar 

Li R, Salih S, Hurtt S (2004) Detection of geminiviruses in sweetpotato by polymerase chain reaction. Plant Dis 88:1347–1351. https://doi.org/10.1094/PDIS.2004.88.12.1347. (PMID: 30795196)

Article  CAS  PubMed  Google Scholar 

Lozano G, Trenado HP, Valverde RA, Navas-Castillo J (2009) Novel begomovirus species of recombinant nature in sweet potato (Ipomoea batatas) and Ipomoea indica: taxonomic and phylogenetic implications. J Gen Virol 90:2550–2562. https://doi.org/10.1099/vir.0.012542-0

Article  CAS  PubMed  Google Scholar 

Luo Z, Yao Z, Yang Y, Wang Z, Zou H, Zhang X, Chen J, Fang B, Huang L (2023) Genetic fingerprint construction and genetic diversity analysis of sweet potato (Ipomoea batatas) germplasm resources. BMC Plant Biol 23:1–14. https://doi.org/10.1186/s12870-023-04329-1

Article  Google Scholar 

Marin FR, Vianna MS, Nassif DSP (2019) Challenges, constraints, and limitations of cane biofuels. In: Khan MT, Khan IA (eds) Sugarcane Biofuels: status, potential, and prospects of the sweet crop to fuel the world. Springer Nature Switzerland pp389–407. https://doi.org/10.1007/978-3-030-18597-8_17

Marković Z, Zrilić A, Šikuten I, Štambuk P, Tomaz I, Vončina D, Maletić E, Kontić JK, Preiner D (2021) Cultivar and phenological stage effects on the success of in vitro meristem culture and GLRaV-3 elimination of croatian autochthonous grapevine cultivars. Agronomy 11:1395. https://doi.org/10.3390/agronomy11071395

Article  CAS  Google Scholar 

Mashilo J, Van Niekerk, Shanahan, RP (2013). Combined thermotherapy and meristem tip culture for efficient elimination of feathery mottle virus in sweet potato (Ipomoea batatas). Acta Hort 1007:719–725 https://doi.org/10.17660/ActaHortic.2013.1007.83

Mehetre GT, Leo VV, Singh G, Sorokan A, Maksimov I, Yadav MK, Upadhyaya K, Hashem A, Alsaleh AN, Dawoud TM, Almaary KS, Singh BP (2021) Current developments and challenges in plant viral diagnostics: a systematic review. Viruses 13:412. https://doi.org/10.3390/v13030412

Article  CAS  PubMed  PubMed Central  Google Scholar 

Melendez JR, Mátyás B, Hena S, Lowy DA, El Salous A (2022) Perspectives in the production of bioethanol: a review of sustainable methods, technologies, and bioprocesses. Renew Sust Energ Rev 160. https://doi.org/10.1016/j.rser.2022.112260

Messmer N, Bohnert P, Askani L, Schumacher S, Voegele RT, Fuchs R (2023) Occurrence and distribution of grapevine pinot gris virus and other grapevine viruses in German viticultural regions. J Plant Dis Prot 130:1385–1399. https://doi.org/10.1007/s41348-023-00776-y

Article  Google Scholar 

Moyer JW, Salazar LF (1989) Viruses and virus-like diseases of sweet potato. Plant Dis 73:451–455

Article  Google Scholar 

Mulabisana MJ, Cloete M, Laurie SM, Mphela W, Maserumule MM, Nhlapo TF, Cochrane NM, Oelofse D, Rey MEC (2019) Yield evaluation of multiple and co-infections of begomoviruses and potyviruses on sweet potato varieties under field conditions and confirmation of multiple infection by NGS. Crop Prot 119:102–112. https://doi.org/10.1016/j.cropro.2019.01.009

Article  Google Scholar 

Murashige T, Skoog F (1962) A revised medium for rapid rrowth and bio assays with tabacco tissue cultures. Physiol Plant 15:473–497.

Comments (0)

No login
gif