Alharbi Y (2022) Mathematical modelling of gene regulation network governing biofilm formation in Bacillus subtilis. University of Dundee, Dundee

Google Scholar 

Beloin C, Roux A, Ghigo J-M (2008) Escherichia coli biofilms. Bact Biofilms 322:249–289

Article  CAS  Google Scholar 

Belykh E, Maystrenko T, Velegzhaninov I, Tavleeva M, Rasova E, Rybak A (2024) Taxonomic diversity and functional traits of soil bacterial communities under radioactive contamination: a review. Microorganisms 12(4):733

Article  PubMed  PubMed Central  CAS  Google Scholar 

Branda SS, Chu F, Kearns DB, Losick R, Kolter R (2006) A major protein component of the Bacillus subtilis biofilm matrix. Mol Microbiol 59(4):1229–1238

Article  PubMed  CAS  Google Scholar 

Branda SS, González-Pastor JE, Ben-Yehuda S, Losick R, Kolter R (2001) Fruiting body formation by Bacillus subtilis. Proc Natl Acad Sci USA 98(20):11621–11626

Article  PubMed  PubMed Central  CAS  Google Scholar 

Branda SS, González-Pastor JE, Dervyn E, Ehrlich SD, Losick R, Kolter R (2004) Genes involved in formation of structured multicellular communities by Bacillus subtilis. J Bacteriol 186(12):3970–3979

Article  PubMed  PubMed Central  CAS  Google Scholar 

Branda SS, Vik Å, Friedman L, Kolter R (2005) Biofilms: the matrix revisited. Trends Microbiol 13(1):20–26

Article  PubMed  CAS  Google Scholar 

Cairns LS, Hobley L, Stanley-Wall NR (2014) Biofilm formation by Bacillus subtilis: new insights into regulatory strategies and assembly mechanisms. Mol Microbiol 93(4):587–598

Article  PubMed  PubMed Central  CAS  Google Scholar 

Chai Y, Chu F, Kolter R, Losick R (2008) Bistability and biofilm formation in Bacillus subtilis. Mol Microbiol 67(2):254–263

Article  PubMed  CAS  Google Scholar 

Chai Y, Kolter R, Losick R (2009) Paralogous antirepressors acting on the master regulator for biofilm formation in Bacillus subtilis. Mol Microbiol 74(4):876–887

Article  PubMed  PubMed Central  CAS  Google Scholar 

Chai Y, Norman T, Kolter R, Losick R (2010) An epigenetic switch governing daughter cell separation in Bacillus subtilis. Genes Dev 24(8):754–765

Article  PubMed  PubMed Central  CAS  Google Scholar 

Chen Z, Zarazúa-Osorio B, Srivastava P, Fujita M, Igoshin OA (2023) The slowdown of growth rate controls the single-cell distribution of biofilm matrix production via an SinI-SinR-SlrR network. Msystems 8(2):e00622-22

Article  PubMed  PubMed Central  Google Scholar 

Chu F, Kearns DB, Branda SS, Kolter R, Losick R (2006) Targets of the master regulator of biofilm formation in Bacillus subtilis. Mol Microbiol 59(4):1216–1228

Article  PubMed  CAS  Google Scholar 

Dabbagh R, Ghafourian H, Baghvand A, Nabi GR, Riahi H, Nakhli A (2006) Discovery of the second highest level of radioactive mineral spring in Iran. J Radioanal Nucl Chem 269(1):91–94

Article  CAS  Google Scholar 

DeLoughery A, Dengler V, Chai Y, Losick R (2016) Biofilm formation by Bacillus subtilis requires an endoribonuclease-containing multisubunit complex that controls mRNA levels for the matrix gene repressor SinR. Mol Microbiol 99(2):425–437

Article  PubMed  CAS  Google Scholar 

Dong M, Yang X, Liu L, Zhou Z, Deng L, Zhong Z, Liu H, Ma X, Hualin Fu, Cao S (2022) Role of Hfq in glucose utilization, biofilm formation and quorum sensing system in Bacillus subtilis. Biotech Lett 44(7):845–855

Article  CAS  Google Scholar 

Ferreira AC, Fernanda Nobre M, Rainey FA, Silva MT, Wait R, Burghardt J, Chung AP, Da Costa MS (1997) Deinococcus geothermalis sp. nov. and Deinococcus murrayi sp. nov., two extremely radiation-resistant and slightly thermophilic species from hot springs. Int J Syst Evol Microbiol 47(4):939–947

CAS  Google Scholar 

Ganchev I, Tribis L, Georgieva N, Tsankov P, Hristov V (2024) Biofilm formation by Bacillus subtilis and Escherichia coli strains induced by sugars. Oxid Commun 47(1):133–150

CAS  Google Scholar 

Gerwig J, Kiley TB, Gunka K, Stanley-Wall N, Stülke J (2014) The protein tyrosine kinases EpsB and PtkA differentially affect biofilm formation in Bacillus subtilis. Microbiology 160(4):682–691

Article  PubMed  PubMed Central  CAS  Google Scholar 

Ghiassi-Nejad M, Mortazavi SMJ, Cameron JR, Niroomand-Rad A, Karam PA (2002) Very high background radiation areas of Ramsar, Iran: preliminary biological studies. Health Phys 82(1):87–93.

Kampf J, Gerwig J, Kruse K, Cleverley R, Dormeyer M, Grünberger A, Kohlheyer D, Commichau FM, Lewis RJ, Stülke J (2018) Selective pressure for biofilm formation in Bacillus subtilis: differential effect of mutations in the master regulator SinR on bistability. mBio 9(5):e01464-18. https://doi.org/10.1128/mbio.01464-18

Article  PubMed  PubMed Central  CAS  Google Scholar 

Kearns DB, Chu F, Branda SS, Kolter R, Losick R (2005) A master regulator for biofilm formation by Bacillus subtilis. Mol Microbiol 55(3):739–749

Article  PubMed  CAS  Google Scholar 

Khan A, Liu G, Zhang G, Li X (2024) Radiation-resistant bacteria in desiccated soil and their potentiality in applied sciences. Front Microbiol 15:1348758

Article  PubMed  PubMed Central  Google Scholar 

Kobayashi K (2008) SlrR/SlrA controls the initiation of biofilm formation in Bacillus subtilis. Mol Microbiol 69(6):1399–1410

Article  PubMed  CAS  Google Scholar 

Lemon KP, Higgins DE, Kolter R (2007) Flagellar motility is critical for Listeria monocytogenes biofilm formation. J Bacteriol 189(12):4418–4424

Article  PubMed  PubMed Central  CAS  Google Scholar 

Lewis KIM (2001) Riddle of biofilm resistance. Antimicrob Agents Chemother 45(4):999–1007

Article  PubMed  PubMed Central  CAS  Google Scholar 

Liaqat I, Ahmed SI, Jahan N (2013) Biofilm formation and sporulation in Bacillus subtilis. Int J Microbiol Res Rev 4:061–067

Google Scholar 

Meeske AJ, Rodrigues CDA, Brady J, Lim HC, Bernhardt TG, Rudner DZ (2016) High-throughput genetic screens identify a large and diverse collection of new sporulation genes in Bacillus subtilis. PLoS Biol 14(1):e1002341

Article  PubMed  PubMed Central  Google Scholar 

Milton ME, Cavanagh J (2023) The biofilm regulatory network from Bacillus subtilis: a structure-function analysis. J Mol Biol 435(3):167923

Article  PubMed  CAS  Google Scholar 

Morikawa M, Kagihiro S, Haruki M, Takano K, Branda S, Kolter R, Kanaya S (2006) Biofilm formation by a Bacillus subtilis strain that produces γ-polyglutamate. Microbiology 152(9):2801–2807

Article  PubMed  CAS  Google Scholar 

O’Toole GA (2011) Microtiter dish biofilm formation assay. J vis Exp 30(47):2437

Google Scholar 

Pal S, Yuvaraj R, Krishnan H, Venkatraman B, Abraham J, Gopinathan A (2024) Unraveling radiation resistance strategies in two bacterial strains from the high background radiation area of Chavara-Neendakara: a comprehensive whole genome analysis. PLoS ONE 19(6):e0304810

Article  PubMed  PubMed Central  CAS  Google Scholar 

Sohrabi M (2013) World high background natural radiation areas: Need to protect public from radiation exposure. Radiat Meas 50:166–171.

Stanley NR, Britton RA, Grossman AD, Lazazzera BA (2003) Identification of catabolite repression as a physiological regulator of biofilm formation by Bacillus subtilis by use of DNA microarrays. J Bacteriol 185(6):1951–1957

Article