Allakhverdiev SI, Sakamoto A, Nishiyama Y et al (2000) Ionic and osmotic effects of NaCl-induced inactivation of photosystems I and II in Synechococcus Sp. Plant Physiol 123:1047–1056

Andersen SU, Algreen-petersen RG, Hoedl M et al (2007) The conserved cysteine-rich domain of a tesmin/TSO1-like protein binds zinc in vitro and TSO1 is required for both male and female fertility in Arabidopsis thaliana. J Exp Bot 58:3657–3670

Cheng YZ, He GQ, Yang SD et al (2022) Genome-wide identification and expression analysis of JmjC domain-containing genes in grape under MTA treatment. Funct Integr Genomics 22:783–795

Duan P, Wei M, Zhang R et al (2022) Identification and bioinformatic analysis of the cacesa/csls family members and the expression of the CaCslD1 in the flower buds of cms/rf system in pepper. Funct Integr Genomics 22:1411–1431

Gu H, Zhao Z, Wei Y et al (2023) Genome-wide identification and functional analysis of RF2 gene family and the critical role of GhRF2-32 in response to drought stress in cotton. Plants (Basel) 12(14):18

Gupta A, Rico-medina A, Cano-delgado AI (2020) The physiology of plant responses to drought. Science 368:266–269

Hajibarat Z, Saidi A, Hajibarat Z (2022) Genome-wide identification of 14-3-3 gene family and characterization of their expression in developmental stages of Solanum tuberosum under multiple biotic and abiotic stress conditions. Funct Integr Genomics 22:1377–1390

Han Z, Hu Y, Tian Q et al (2020) Genomic signatures and candidate genes of Lint yield and fibre quality improvement in upland cotton in Xinjiang. Plant Biotechnol J 18:2002–2014

Hauser BA, He JQ, Park SO et al (2000) TSO1 is a novel protein that modulates cytokinesis and cell expansion in Arabidopsis. Development 127:2219–2226

Huang G, Mei X, Hu J (2017) The antioxidant activities of natural polysaccharides. Curr Drug Targets 18:1296–1300

Huang G, Wu Z, Percy RG et al (2020) Genome sequence of Gossypium herbaceum and genome updates of Gossypium arboreum and Gossypium hirsutum provide insights into cotton A-genome evolution. Nat Genet 52:516–524

Janiak A, Kwasniewski M, Sowa M et al (2019) Insights into barley root transcriptome under mild drought stress with an emphasis on gene expression regulatory mechanisms. Int J Mol Sci 20(24):6139

Li F, Fan G, Wang K et al (2014) Genome sequence of the cultivated cotton Gossypium arboreum. Nat Genet 46:567–572

Li F, Fan G, Lu C et al (2015) Genome sequence of cultivated upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution. Nat Biotechnol 33:524–530

Li Y, Mo T, Ran L et al (2022) Genome resequencing-based high-density genetic map and QTL detection for yield and fiber quality traits in diploid Asiatic cotton (Gossypium arboreum). Mol Genet Genomics 297:199–212

Liu W, Zhang B (2022) The landscape of genome sequencing and assembling in plants. Funct Integr Genomics 22:1147–1152

Lu T, Dou Y, Zhang C (2013) Fuzzy clustering of CPP family in plants with evolution and interaction analyses. BMC Bioinformatics 14(Suppl 13):S10

Lu X, Zhang H, Hu J et al (2022) Genome-wide identification and characterization of bHLH family genes from Orchardgrass and the functional characterization of DgbHLH46 and DgbHLH128 in drought and salt tolerance. Funct Integr Genomics 22:1331–1344

Mallick B, Kumari M, Pradhan SK et al (2022) Genome-wide analysis and characterization of heat shock transcription factors (Hsfs) in common bean (Phaseolus vulgaris L). Funct Integr Genomics 22:743–756

Oliveira-filho ER, Voiniciuc C, Hanson AD (2023) Adapting enzymes to improve their functionality in plants: why and how. Biochem Soc Trans 51:1957–1966

Sedaghat M, Tahmasebi-sarvestani Z, Emam Y et al (2017) Physiological and antioxidant responses of winter wheat cultivars to Strigolactone and Salicylic acid in drought. Plant Physiol Biochem 119:59–69

Sheri V, Kumar M, Jaconis S et al (2023) Antioxidant defense in cotton under environmental stresses: unraveling the crucial role of a universal defense regulator for enhanced cotton sustainability. Plant Physiol Biochem 204:108141

Sijacic P, Wang W, Liu Z (2011) Recessive antimorphic alleles overcome functionally redundant loci to reveal TSO1 function in Arabidopsis flowers and meristems. PLoS Genet 7(11):e1002352

Simmons AR, Davies KA, Wang W et al (2019) SOL1 and SOL2 regulate fate transition and cell divisions in the Arabidopsis stomatal lineage. Development 146(3) dev.171066

Song X, Zhang Y, Wu F et al (2016) Genome-wide analysis of the maize (Zea May L.) CPP-like gene family and expression profiling under abiotic stress. Genet Mol Res 15 (3)

Su J, Song S, Wang Y et al (2023) Genome-wide identification and expression analysis of DREB family genes in cotton. BMC Plant Biol 23(1):169

Sun Y, Jia X, Chen D et al (2023) Genome-wide identification and expression analysis of cysteine-rich polycomb-like protein (CPP) gene family in tomato. Int J Mol Sci 24(6):5762

Theocharis A, Clement C, Barka EA (2012) Physiological and molecular changes in plants grown at low temperatures. Planta 235:1091–1105

Tsikas D (2017) Assessment of lipid peroxidation by measuring malondialdehyde (MDA) and relatives in biological samples: analytical and biological challenges. Anal Biochem 524:13–30

Ullah A, Sun H, Yang X et al (2017) Drought coping strategies in cotton: increased crop per drop. Plant Biotechnol J 15:271–284

Ullah U, Buttar ZA, Shalmani A et al (2022) Genome-wide identification and expression analysis of CPP-like gene family in Triticum aestivum L. under different hormone and stress conditions. Open Life Sci 17:544–562

Valliyodan B, Nguyen HT (2006) Understanding regulatory networks and engineering for enhanced drought tolerance in plants. Curr Opin Plant Biol 9:189–195

Wang K, Wang Z, Li F et al (2012) The draft genome of a diploid cotton Gossypium raimondii. Nat Genet 44:1098–1103

Wang N, Xu S, Sun Y et al (2019) The cotton WRKY transcription factor (GhWRKY33) reduces Transgenic Arabidopsis resistance to drought stress. Sci Rep 9:724

Wang Y, Zeng J, Yu Y et al (2024) Silencing of GhSINAT5 reduces drought resistance and salt tolerance in cotton. Genes (Basel) 15(8):1063

Xing L, Peng K, Xue S et al (2022) Genome-wide analysis of zinc finger-homeodomain (ZF-HD) transcription factors in diploid and tetraploid cotton. Funct Integr Genomics 22:1269–1281

Yang Z, Gu S, Wang X et al (2008) Molecular evolution of the CPP-like gene family in plants: insights from comparative genomics of Arabidopsis and rice. J Mol Evol 67:266–277

Yuan D, Tang Z, Wang M et al (2015) The genome sequence of sea-island cotton (Gossypium barbadense) provides insights into the allopolyploidization and development of superior spinnable fibres. Sci Rep 5:17662

Zhang L, Zhao H, Wang Y et al (2015) Genome-wide identification and expression analysis of the CPP-like gene family in soybean. Genet Mol Res 14:1260–1268

Zhang S, Shan H, Bo X et al (2025) Identification of the STY13 gene family across the entire genome and an analysis of the essential function of GhSTY13-12 in cotton’s response to abiotic stress. Funct Integr Genom 25(1):1–18